gvsig-raster / org.gvsig.raster.netcdf / trunk / org.gvsig.raster.netcdf / org.gvsig.raster.netcdf.io / src / main / java / org / gvsig / raster / netcdf / io / NetCDFProvider.java @ 4181
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/* gvSIG. Geographic Information System of the Valencian Government
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*
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* Copyright (C) 2007-2008 Infrastructures and Transports Department
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* of the Valencian Government (CIT)
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*
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* This program is free software; you can redistribute it and/or
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* modify it under the terms of the GNU General Public License
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* as published by the Free Software Foundation; either version 2
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* of the License, or (at your option) any later version.
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*
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* This program is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with this program; if not, write to the Free Software
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* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
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* MA 02110-1301, USA.
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*
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*/
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package org.gvsig.raster.netcdf.io; |
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import java.awt.geom.AffineTransform; |
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import java.awt.geom.Point2D; |
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import java.awt.geom.Rectangle2D; |
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import java.io.File; |
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import java.io.IOException; |
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import java.net.URI; |
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import java.net.URISyntaxException; |
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import java.util.List; |
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import org.slf4j.Logger; |
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import org.slf4j.LoggerFactory; |
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import org.gvsig.fmap.dal.DALFileLocator; |
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import org.gvsig.fmap.dal.DALLocator; |
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import org.gvsig.fmap.dal.DataStore; |
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import org.gvsig.fmap.dal.coverage.RasterLocator; |
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import org.gvsig.fmap.dal.coverage.dataset.Buffer; |
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import org.gvsig.fmap.dal.coverage.datastruct.BandList; |
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import org.gvsig.fmap.dal.coverage.datastruct.Extent; |
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import org.gvsig.fmap.dal.coverage.exception.BandAccessException; |
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import org.gvsig.fmap.dal.coverage.exception.FileNotOpenException; |
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import org.gvsig.fmap.dal.coverage.exception.InvalidSetViewException; |
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import org.gvsig.fmap.dal.coverage.exception.InvalidSourceException; |
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import org.gvsig.fmap.dal.coverage.exception.NotSupportedExtensionException; |
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import org.gvsig.fmap.dal.coverage.exception.ParsingException; |
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import org.gvsig.fmap.dal.coverage.exception.ProcessInterruptedException; |
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import org.gvsig.fmap.dal.coverage.exception.RasterDriverException; |
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import org.gvsig.fmap.dal.coverage.store.parameter.RasterFileStoreParameters; |
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import org.gvsig.fmap.dal.coverage.store.props.ColorInterpretation; |
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import org.gvsig.fmap.dal.exception.OpenException; |
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import org.gvsig.fmap.dal.spi.DataManagerProviderServices; |
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import org.gvsig.fmap.dal.spi.DataStoreProviderServices; |
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import org.gvsig.metadata.MetadataLocator; |
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import org.gvsig.raster.cache.tile.provider.TileServer; |
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import org.gvsig.raster.impl.DefaultRasterManager; |
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import org.gvsig.raster.impl.buffer.SpiRasterQuery; |
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import org.gvsig.raster.impl.datastruct.DefaultNoData; |
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import org.gvsig.raster.impl.datastruct.ExtentImpl; |
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import org.gvsig.raster.impl.provider.AbstractRasterProvider; |
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import org.gvsig.raster.impl.provider.RasterProvider; |
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import org.gvsig.raster.impl.provider.tile.FileTileServer; |
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import org.gvsig.raster.impl.store.DefaultRasterStore; |
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import org.gvsig.raster.impl.store.DefaultStoreFactory; |
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import org.gvsig.raster.impl.store.properties.DataStoreColorInterpretation; |
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import org.gvsig.raster.impl.store.properties.DataStoreTransparency; |
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import org.gvsig.tools.ToolsLocator; |
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import ucar.ma2.Array; |
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import ucar.ma2.DataType; |
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import ucar.ma2.InvalidRangeException; |
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import ucar.ma2.Range; |
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import ucar.nc2.dt.GridDatatype; |
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import ucar.nc2.dt.grid.GridDataset; |
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import ucar.unidata.geoloc.ProjectionRect; |
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/**
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* Data provider for NetCDF files with raster data
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*
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* @author Nacho Brodin (nachobrodin@gmail.com)
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*/
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public class NetCDFProvider extends AbstractRasterProvider { |
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public static String NAME = "NetCDF Raster"; |
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public static String DESCRIPTION = "NetCDF Raster file"; |
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public final String METADATA_DEFINITION_NAME = NAME; |
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private Extent viewRequest = null; |
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private TileServer tileServer = null; |
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private boolean open = false; |
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private GridDataset gridNetCDF = null; |
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private List<GridDatatype> gridList = null; |
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private GridDatatype selectedGridDataType = null; |
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private DataStoreTransparency fileTransparency = null; |
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private static final Logger logger = LoggerFactory.getLogger(NetCDFProvider.class); |
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protected static String[] formatList = null; |
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public static void register() { |
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DataManagerProviderServices dataman = (DataManagerProviderServices) DALLocator.getDataManager(); |
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RasterLocator.getManager().getProviderServices().registerFileProvidersTiled(NetCDFProvider.class); |
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registerFormats(); |
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if (dataman != null && !dataman.getStoreProviders().contains(NAME)) { |
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dataman.registerStoreProvider(NAME, |
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NetCDFProvider.class, NetCDFDataParametersImpl.class); |
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} |
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/*if (!dataman.getExplorerProviders().contains(NetCDFFilesystemServerExplorer.NAME)) {
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dataman.registerExplorerProvider(NetCDFFilesystemServerExplorer.NAME, NetCDFFilesystemServerExplorer.class, NetCDFServerExplorerParameters.class);
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}*/
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if(DALFileLocator.getFilesystemServerExplorerManager() != null) |
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DALFileLocator.getFilesystemServerExplorerManager().registerProvider( |
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NAME, DESCRIPTION, |
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NetCDFFilesystemServerExplorer.class); |
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dataman.registerStoreFactory(NAME, DefaultStoreFactory.class); |
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} |
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private static void registerFormats() { |
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formatList = new String[] {"nc", "nc4"}; |
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for (int i = 0; i < formatList.length; i++) |
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RasterLocator.getManager().getProviderServices().addFormat(formatList[i], NetCDFProvider.class); |
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} |
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public String[] getFormatList() { |
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return formatList;
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} |
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/**
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* Returns true if the extension is supported and false if doesn't
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* @param ext
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* @return
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*/
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public boolean isExtensionSupported(String ext) { |
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if(ext.indexOf(".") != -1) |
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ext = ext.substring(ext.lastIndexOf(".") + 1, ext.length()); |
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for (int i = 0; i < formatList.length; i++) { |
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if(formatList[i].compareTo(ext) == 0) |
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return true; |
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} |
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return false; |
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} |
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public NetCDFProvider() {
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} |
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/**
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* Opens the dataset.
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* @param proj Projection
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* @param fName File name
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* @throws NotSupportedExtensionException
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* @deprecated use {@link #NetCDFProvider(URI)}, this constructor will be removed in gvSIG 2.5
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*/
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public NetCDFProvider(String params) throws NotSupportedExtensionException, OpenException { |
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super(params);
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logger.info("Deprecated use of NetCDFProvider constructor");
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if(params instanceof String) { |
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NetCDFDataParameters p = new NetCDFDataParametersImpl();
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URI uriObj;
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try {
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uriObj = new URI((String)params); |
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} catch (URISyntaxException e) { |
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throw new OpenException("Can't create URI from "+(String)params, e); |
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} |
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p.setURI(uriObj); |
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super.init(p, null, ToolsLocator.getDynObjectManager() |
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.createDynObject( |
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MetadataLocator.getMetadataManager().getDefinition( |
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DataStore.METADATA_DEFINITION_NAME))); |
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init(p, null);
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} |
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} |
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/**
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* Opens the dataset.
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* @param proj Projection
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* @param fName File name
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* @throws NotSupportedExtensionException
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*/
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public NetCDFProvider(URI uri) throws NotSupportedExtensionException, OpenException { |
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super(uri);
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NetCDFDataParameters p = new NetCDFDataParametersImpl();
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p.setURI(uri); |
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super.init(
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p, |
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null,
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ToolsLocator.getDynObjectManager().createDynObject( |
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MetadataLocator.getMetadataManager().getDefinition(DataStore.METADATA_DEFINITION_NAME))); |
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init(p, null);
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} |
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public NetCDFProvider (NetCDFDataParameters params,
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DataStoreProviderServices storeServices) throws NotSupportedExtensionException, OpenException {
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super(params, storeServices, ToolsLocator.getDynObjectManager()
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.createDynObject( |
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MetadataLocator.getMetadataManager().getDefinition( |
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DataStore.METADATA_DEFINITION_NAME))); |
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init(params, storeServices); |
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} |
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/**
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* Build file references
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* @param proj Projection
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* @param param Load parameters
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* @throws NotSupportedExtensionException
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*/
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public void init (NetCDFDataParameters params, |
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DataStoreProviderServices storeServices) throws NotSupportedExtensionException, OpenException {
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if(((RasterFileStoreParameters)params).getFile().exists()) {
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String fileName = ((RasterFileStoreParameters)params).getFile().getAbsolutePath();
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try {
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gridNetCDF = GridDataset.open(fileName); |
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gridList = gridNetCDF.getGrids(); |
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if(gridList.size() == 0) |
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throw new OpenException("There is not a grid variable", null); |
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selectedGridDataType = gridList.get(0);
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//netCDFFile = NetcdfFile.open(((RasterFileStoreParameters)params).getFile().getAbsolutePath());
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} catch (IOException e) { |
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throw new OpenException("Imposible to read the file", e); |
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} |
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/*List<Variable> variableList = netCDFFile.getVariables();
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Iterator<Variable> it = variableList.iterator();
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while(it.hasNext()) {
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Variable var = it.next();
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System.out.println("===>>" + var.getName());
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}*/
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setParam(storeServices, params); |
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reloadMetadataFromGrid(); |
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noData = new DefaultNoData(Double.NaN, Double.NaN, fileName); |
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load(); |
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} else
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setParam(storeServices, params); |
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super.init();
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selectSubdataset(getId(0, 0, 0)); |
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try {
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loadFromRmf(getRmfBlocksManager()); |
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} catch (ParsingException e) {
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//No lee desde rmf
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} |
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open = true;
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} |
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/**
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* Reloads metadata using the selected grid
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*/
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private void reloadMetadataFromGrid() { |
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//wktProjection = null;
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//CrsWkt crs = new CrsWkt(wktProjection);
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//IProjection proj = CRSFactory.getCRS("EPSG:23030");
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/*LatLonRect gcs = selectedGridDataType.getCoordinateSystem().getLatLonBoundingBox();
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getColorInterpretation();
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double scaleX = gcs.getWidth() / selectedGridDataType.getXDimension().getLength();
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double scaleY = gcs.getHeight() / selectedGridDataType.getYDimension().getLength();
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ownTransformation = new AffineTransform(
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scaleX, 0,
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0, -scaleY,
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gcs.getLonMin(),
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gcs.getLatMax());*/
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ProjectionRect pRect = selectedGridDataType.getCoordinateSystem().getBoundingBox(); |
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double scaleX = pRect.getWidth() / selectedGridDataType.getXDimension().getLength();
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double scaleY = pRect.getHeight() / selectedGridDataType.getYDimension().getLength();
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ownTransformation = new AffineTransform( |
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scaleX, 0,
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0, -scaleY,
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pRect.getMinX(), |
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pRect.getMaxY()); |
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externalTransformation = (AffineTransform)ownTransformation.clone();
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bandCount = 1; //One variable is always shown |
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setDataType(); |
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} |
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/**
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* @param dataType The dataType to set.
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*/
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private void setDataType() { |
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DataType dt = selectedGridDataType.getDataType(); |
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int type = Buffer.TYPE_UNDEFINED; |
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if(dt.name() == DataType.BYTE.name()) {
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type = Buffer.TYPE_BYTE;
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} |
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if(dt.name() == DataType.SHORT.name()) {
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type = Buffer.TYPE_SHORT;
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} |
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if(dt.name() == DataType.INT.name()) {
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type = Buffer.TYPE_INT;
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} |
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if(dt.name() == DataType.DOUBLE.name()) {
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type = Buffer.TYPE_DOUBLE;
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} |
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if(dt.name() == DataType.FLOAT.name()) {
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type = Buffer.TYPE_FLOAT;
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} |
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if(dt.name() == DataType.LONG.name()) {
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type = Buffer.TYPE_DOUBLE;
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} |
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int[] dtype = new int[getBandCount()]; |
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for (int i = 0; i < dtype.length; i++) |
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dtype[i] = type; |
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setDataType(dtype); |
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} |
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public RasterProvider load() {
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return this; |
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} |
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public boolean isOpen() { |
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return open;
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} |
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public void close() { |
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try {
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gridNetCDF.close(); |
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} catch (IOException e) { |
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logger.error("Error closing file", e);
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} |
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} |
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public URI translateURI(URI uri) { |
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return uri;
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} |
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/**
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* Asigna el extent de la vista actual. existe un fichero .rmf debemos hacer una transformaci�n
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* de la vista asignada ya que la petici�n viene en coordenadas del fichero .rmf y la vista (v)
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* ha de estar en coordenadas del fichero.
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*/
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public void setView(Extent e) { |
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viewRequest = new ExtentImpl(e);
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} |
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public Extent getView() {
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return viewRequest;
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} |
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public double getWidth() { |
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return selectedGridDataType.getXDimension().getLength();
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} |
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public double getHeight() { |
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return selectedGridDataType.getYDimension().getLength();
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} |
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public Object readBlock(int pos, int blockHeight, double scale) |
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throws InvalidSetViewException, FileNotOpenException, RasterDriverException, ProcessInterruptedException {
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NetCDFDataParameters p = (NetCDFDataParameters)param; |
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if(pos < 0) |
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throw new InvalidSetViewException("Request out of grid"); |
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if((pos + blockHeight) > getHeight())
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blockHeight = Math.abs(((int)getHeight()) - pos); |
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Buffer buf = DefaultRasterManager.getInstance().createBuffer(getDataType()[0], (int)getWidth(), blockHeight, 1, true); |
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try {
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int time = p.getFieldTime();
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int level = getLevelValue();
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Range rangeY = new Range(pos, pos + blockHeight - 1, 1); |
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Range rangeX = new Range(0, (int)(getWidth() - 1), 1); |
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GridDatatype dt = selectedGridDataType.makeSubset(null, null, null, null /*getTime(1), getLevel(1)*/, rangeY, rangeX); |
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Array values = dt.readDataSlice(time, level, -1, -1); |
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return arrayValuesToBuffer(values, buf, rangeX.length(), rangeY.length(), null); |
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} catch (IOException e) { |
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throw new RasterDriverException("Error reading a slice", e); |
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} catch (InvalidRangeException e) {
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throw new RasterDriverException("Error reading a slice", e); |
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} |
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} |
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|
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public Object getData(int x, int y, int band)throws InvalidSetViewException, FileNotOpenException, RasterDriverException { |
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NetCDFDataParameters p = (NetCDFDataParameters)param; |
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if(x < 0 || y < 0 || x >= getWidth() || y >= getHeight()) |
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throw new InvalidSetViewException("Request out of grid"); |
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try {
|
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int strideX = 1; |
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int strideY = 1; |
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Range rangeY = new Range((int)(getHeight() - y), (int)(getHeight() - y), strideY); |
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Range rangeX = new Range(x, x, strideX);
|
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|
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selectSubdataset(); |
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int time = p.getFieldTime();
|
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int level = getLevelValue();
|
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GridDatatype dt = selectedGridDataType.makeSubset(null, null, null, null, rangeY, rangeX); |
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Array values = dt.readDataSlice(time, level, -1, -1); |
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Object data = null; |
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|
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if(getDataType()[0] == Buffer.TYPE_BYTE) { |
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data = new java.lang.Integer(values.getByte(0)); |
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} |
399 |
|
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if(getDataType()[0] == Buffer.TYPE_SHORT) { |
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data = new java.lang.Integer(values.getShort(0)); |
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} |
403 |
|
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if(getDataType()[0] == Buffer.TYPE_INT) { |
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data = new java.lang.Integer(values.getInt(0)); |
406 |
} |
407 |
|
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if(getDataType()[0] == Buffer.TYPE_FLOAT) { |
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data = new java.lang.Float(values.getFloat(0)); |
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} |
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if(getDataType()[0] == Buffer.TYPE_DOUBLE) { |
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data = new java.lang.Double(values.getDouble(0)); |
413 |
} |
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return data;
|
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} catch (IOException e) { |
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throw new RasterDriverException("Error reading a slice", e); |
417 |
} catch (InvalidRangeException e) {
|
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throw new RasterDriverException("Error reading a slice", e); |
419 |
} |
420 |
} |
421 |
|
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@Override
|
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public void loadBuffer(SpiRasterQuery query) |
424 |
throws ProcessInterruptedException, RasterDriverException {
|
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NetCDFDataParameters p = (NetCDFDataParameters)param; |
426 |
setView(query.getAdjustedRequestBoundingBox()); |
427 |
|
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Point2D ul = new Point2D.Double(viewRequest.getULX(), viewRequest.getULY()); |
429 |
Point2D lr = new Point2D.Double(viewRequest.getLRX(), viewRequest.getLRY()); |
430 |
ul = worldToRaster(ul); |
431 |
lr = worldToRaster(lr); |
432 |
ul.setLocation(ul.getX() < 0 ? 0 : ul.getX(), ul.getY() < 0 ? 0 : ul.getY()); |
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lr.setLocation(lr.getX() < 0 ? 0 : lr.getX(), lr.getY() < 0 ? 0 : lr.getY()); |
434 |
ul.setLocation(ul.getX() >= getWidth() ? getWidth() - 1 : ul.getX(), ul.getY() >= getHeight() ? getHeight() - 1 : ul.getY()); |
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lr.setLocation(lr.getX() >= getWidth() ? getWidth() - 1 : lr.getX(), lr.getY() >= getHeight() ? getHeight() - 1 : lr.getY()); |
436 |
|
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adjustPoints(ul, lr); |
438 |
|
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//int width = Math.abs(((int)lr.getX()) - ((int)ul.getX()));
|
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//int height = Math.abs(((int)lr.getY()) - ((int)ul.getY()));
|
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try {
|
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int strideX = 1; |
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int strideY = 1; |
444 |
Range rangeY = new Range((int)(getHeight() - lr.getY()), (int)(getHeight() - ul.getY() - 1), strideY <= 0 ? 1 : strideY); |
445 |
Range rangeX = new Range((int)ul.getX(), (int)(lr.getX() - 1), strideX <= 0 ? 1 : strideX); |
446 |
|
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selectSubdataset(); |
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int time = p.getFieldTime();
|
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int level = getLevelValue();
|
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GridDatatype dt = selectedGridDataType.makeSubset(null, null, null, null /*getTime(strideX), getLevel(strideX)*/, rangeY, rangeX); |
451 |
Array values = dt.readDataSlice(time, level, -1, -1); |
452 |
Rectangle2D r = query.getBufferForProviders().getDataExtent();
|
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Buffer rasterBuf = arrayValuesToBuffer(
|
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values, |
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query.getBufferForProviders(), |
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rangeX.length(), |
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rangeY.length(), |
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query.getBandList()); |
459 |
rasterBuf.setDataExtent(r); |
460 |
query.setBufferResult(rasterBuf); |
461 |
} catch (IOException e) { |
462 |
throw new RasterDriverException("Error reading a slice", e); |
463 |
} catch (InvalidRangeException e) {
|
464 |
throw new RasterDriverException("Error reading a slice", e); |
465 |
} |
466 |
|
467 |
} |
468 |
|
469 |
|
470 |
/*public Buffer getWindow(Extent extent, BandList bandList, Buffer rasterBuf, TaskStatus status)
|
471 |
throws ProcessInterruptedException, RasterDriverException {
|
472 |
NetCDFDataParameters p = (NetCDFDataParameters)param;
|
473 |
setView(extent);
|
474 |
|
475 |
Point2D ul = new Point2D.Double(viewRequest.getULX(), viewRequest.getULY());
|
476 |
Point2D lr = new Point2D.Double(viewRequest.getLRX(), viewRequest.getLRY());
|
477 |
ul = worldToRaster(ul);
|
478 |
lr = worldToRaster(lr);
|
479 |
ul.setLocation(ul.getX() < 0 ? 0 : ul.getX(), ul.getY() < 0 ? 0 : ul.getY());
|
480 |
lr.setLocation(lr.getX() < 0 ? 0 : lr.getX(), lr.getY() < 0 ? 0 : lr.getY());
|
481 |
ul.setLocation(ul.getX() > getWidth() ? getWidth() : ul.getX(), ul.getY() > getHeight() ? getHeight() : ul.getY());
|
482 |
lr.setLocation(lr.getX() > getWidth() ? getWidth() : lr.getX(), lr.getY() > getHeight() ? getHeight() : lr.getY());
|
483 |
|
484 |
adjustPoints(ul, lr);
|
485 |
|
486 |
try {
|
487 |
int strideX = 1;
|
488 |
int strideY = 1;
|
489 |
Range rangeY = new Range((int)(getHeight() - lr.getY()), (int)(getHeight() - ul.getY() - 1), strideY);
|
490 |
Range rangeX = new Range((int)ul.getX(), (int)(lr.getX() - 1), strideX);
|
491 |
|
492 |
selectSubdataset();
|
493 |
int time = p.getFieldTime();
|
494 |
int level = getLevelValue();
|
495 |
GridDatatype dt = selectedGridDataType.makeSubset(null, null, null, null , rangeY, rangeX);
|
496 |
Array values = dt.readDataSlice(time, level, -1, -1);
|
497 |
rasterBuf = arrayValuesToBuffer(values, rasterBuf, rangeX.length(), rangeY.length(), bandList);
|
498 |
} catch (IOException e) {
|
499 |
throw new RasterDriverException("Error reading a slice", e);
|
500 |
} catch (InvalidRangeException e) {
|
501 |
throw new RasterDriverException("Error reading a slice", e);
|
502 |
}
|
503 |
|
504 |
return rasterBuf;
|
505 |
}*/
|
506 |
|
507 |
/*public Buffer getWindow(Extent extent, int bufWidth, int bufHeight,
|
508 |
BandList bandList, Buffer rasterBuf, boolean adjustToExtent, TaskStatus status) throws ProcessInterruptedException, RasterDriverException {
|
509 |
NetCDFDataParameters p = (NetCDFDataParameters)param;
|
510 |
setView(extent);
|
511 |
|
512 |
Point2D ul = new Point2D.Double(viewRequest.getULX(), viewRequest.getULY());
|
513 |
Point2D lr = new Point2D.Double(viewRequest.getLRX(), viewRequest.getLRY());
|
514 |
ul = worldToRaster(ul);
|
515 |
lr = worldToRaster(lr);
|
516 |
ul.setLocation(ul.getX() < 0 ? 0 : ul.getX(), ul.getY() < 0 ? 0 : ul.getY());
|
517 |
lr.setLocation(lr.getX() < 0 ? 0 : lr.getX(), lr.getY() < 0 ? 0 : lr.getY());
|
518 |
ul.setLocation(ul.getX() >= getWidth() ? getWidth() - 1 : ul.getX(), ul.getY() >= getHeight() ? getHeight() - 1 : ul.getY());
|
519 |
lr.setLocation(lr.getX() >= getWidth() ? getWidth() - 1 : lr.getX(), lr.getY() >= getHeight() ? getHeight() - 1 : lr.getY());
|
520 |
|
521 |
adjustPoints(ul, lr);
|
522 |
|
523 |
int width = Math.abs(((int)lr.getX()) - ((int)ul.getX()));
|
524 |
int height = Math.abs(((int)lr.getY()) - ((int)ul.getY()));
|
525 |
|
526 |
try {
|
527 |
int strideX = width / rasterBuf.getWidth();
|
528 |
int strideY = height / rasterBuf.getHeight();
|
529 |
Range rangeY = new Range((int)(getHeight() - lr.getY()), (int)(getHeight() - ul.getY() - 1), strideY <= 0 ? 1 : strideY);
|
530 |
Range rangeX = new Range((int)ul.getX(), (int)(lr.getX() - 1), strideX <= 0 ? 1 : strideX);
|
531 |
|
532 |
selectSubdataset();
|
533 |
int time = p.getFieldTime();
|
534 |
int level = getLevelValue();
|
535 |
GridDatatype dt = selectedGridDataType.makeSubset(null, null, null, null , rangeY, rangeX);
|
536 |
Array values = dt.readDataSlice(time, level, -1, -1);
|
537 |
rasterBuf = arrayValuesToBuffer(values, rasterBuf, rangeX.length(), rangeY.length(), bandList);
|
538 |
} catch (IOException e) {
|
539 |
throw new RasterDriverException("Error reading a slice", e);
|
540 |
} catch (InvalidRangeException e) {
|
541 |
throw new RasterDriverException("Error reading a slice", e);
|
542 |
}
|
543 |
|
544 |
return rasterBuf;
|
545 |
}*/
|
546 |
|
547 |
/*public Buffer getWindow(int x, int y, int w, int h,
|
548 |
BandList bandList, Buffer rasterBuf, TaskStatus status) throws ProcessInterruptedException, RasterDriverException {
|
549 |
try {
|
550 |
NetCDFDataParameters p = (NetCDFDataParameters)param;
|
551 |
int strideX = 1;
|
552 |
int strideY = 1;
|
553 |
Range rangeY = new Range((int)(h - y), (int)(h - y - 1), strideY);
|
554 |
Range rangeX = new Range((int)x, (int)(x + w - 1), strideX);
|
555 |
|
556 |
selectSubdataset();
|
557 |
int time = p.getFieldTime();
|
558 |
int level = getLevelValue();
|
559 |
GridDatatype dt = selectedGridDataType.makeSubset(null, null, null, null, rangeY, rangeX);
|
560 |
Array values = dt.readDataSlice(time, level, -1, -1);
|
561 |
rasterBuf = arrayValuesToBuffer(values, rasterBuf, rangeX.length(), rangeY.length(), bandList);
|
562 |
} catch (IOException e) {
|
563 |
throw new RasterDriverException("Error reading a slice", e);
|
564 |
} catch (InvalidRangeException e) {
|
565 |
throw new RasterDriverException("Error reading a slice", e);
|
566 |
}
|
567 |
|
568 |
return rasterBuf;
|
569 |
}*/
|
570 |
|
571 |
/**
|
572 |
* Gets the Range of the selected time or null if there is not a selected time
|
573 |
* @param strideX
|
574 |
* @return
|
575 |
* @throws InvalidRangeException
|
576 |
*/
|
577 |
@SuppressWarnings("unused") |
578 |
private Range getTime(int strideX) throws InvalidRangeException { |
579 |
NetCDFDataParameters p = (NetCDFDataParameters)param; |
580 |
int time = p.getFieldTime();
|
581 |
return new Range(time, time, strideX); |
582 |
} |
583 |
|
584 |
/*private int getTimeValue() {
|
585 |
int time = 0;
|
586 |
if(param.hasDynValue(NetCDFDataParameters.FIELD_TIME))
|
587 |
time = ((Integer)param.getDynValue(NetCDFDataParameters.FIELD_TIME)).intValue();
|
588 |
return time;
|
589 |
}*/
|
590 |
|
591 |
/**
|
592 |
* Gets the Range of the selected level or null if there is not a selected level
|
593 |
* @param strideX
|
594 |
* @return
|
595 |
* @throws InvalidRangeException
|
596 |
*/
|
597 |
@SuppressWarnings("unused") |
598 |
private Range getLevel(int strideX) throws InvalidRangeException { |
599 |
int level = getLevelValue();
|
600 |
return new Range(level, level, strideX); |
601 |
} |
602 |
|
603 |
private int getLevelValue() { |
604 |
int level = 0; |
605 |
if(param.hasDynValue(NetCDFDataParameters.FIELD_LEVEL) && param.getDynValue(NetCDFDataParameters.FIELD_LEVEL) != null) |
606 |
level = ((Integer)param.getDynValue(NetCDFDataParameters.FIELD_LEVEL)).intValue();
|
607 |
return level;
|
608 |
} |
609 |
|
610 |
|
611 |
/**
|
612 |
* Selects the GridDataType using the selected variable in the parameters
|
613 |
*/
|
614 |
public void selectSubdataset() { |
615 |
if(param.hasDynValue(NetCDFDataParameters.FIELD_VARIABLE)) {
|
616 |
NetCDFDataParameters p = (NetCDFDataParameters)param; |
617 |
String variable = (String)param.getDynValue(NetCDFDataParameters.FIELD_VARIABLE); |
618 |
if(variable != null) { |
619 |
for (int j = 0; j < gridList.size(); j++) { |
620 |
if(gridList.get(j).getName().compareTo(variable) == 0) { |
621 |
selectedGridDataType = gridList.get(j); |
622 |
reloadMetadataFromGrid(); |
623 |
super.selectSubdataset(getId(j, getLevelValue(), p.getFieldTime()));
|
624 |
} |
625 |
} |
626 |
} |
627 |
} |
628 |
} |
629 |
|
630 |
/**
|
631 |
* Gets the identifier of a subdataset
|
632 |
* @param grid
|
633 |
* @param level
|
634 |
* @param time
|
635 |
* @return
|
636 |
*/
|
637 |
private String getId(int grid, int level, int time) { |
638 |
return grid + "-" + level + "-" + time; |
639 |
} |
640 |
|
641 |
/**
|
642 |
* Loads a Buffer object from an netCDF Array.
|
643 |
* @param values
|
644 |
* @param rasterBuf
|
645 |
* @param w
|
646 |
* @param h
|
647 |
* @return
|
648 |
*/
|
649 |
private Buffer arrayValuesToBuffer(Array values, Buffer rasterBuf, int w, int h, BandList bandList) { |
650 |
Buffer buf = null; |
651 |
boolean resampling = false; |
652 |
|
653 |
if((rasterBuf.getWidth() * rasterBuf.getHeight()) != values.getSize()) {
|
654 |
buf = DefaultRasterManager.getInstance().createBuffer(getDataType()[0], w, h, rasterBuf.getBandCount(), true); |
655 |
resampling = true;
|
656 |
} else
|
657 |
buf = rasterBuf; |
658 |
|
659 |
int[] drawableBands = bandList != null ? bandList.getBufferBandToDraw(getURIOfFirstProvider().getPath(), 0) : new int[1]; |
660 |
if(drawableBands == null || (drawableBands.length == 1 && drawableBands[0] == -1)) |
661 |
return rasterBuf;
|
662 |
|
663 |
if(getDataType()[0] == Buffer.TYPE_BYTE) { |
664 |
for (int i = 0; i < values.getSize(); i++) { |
665 |
int[] rc = getColAndRow(i, buf); |
666 |
for (int iBands = 0; iBands < drawableBands.length; iBands++) |
667 |
buf.setElem(rc[0], rc[1], drawableBands[iBands], values.getByte(i)); |
668 |
} |
669 |
} |
670 |
|
671 |
if(getDataType()[0] == Buffer.TYPE_SHORT) { |
672 |
for (int i = 0; i < values.getSize(); i++) { |
673 |
int[] rc = getColAndRow(i, buf); |
674 |
for (int iBands = 0; iBands < drawableBands.length; iBands++) |
675 |
buf.setElem(rc[0], rc[1], drawableBands[iBands], values.getShort(i)); |
676 |
} |
677 |
} |
678 |
|
679 |
if(getDataType()[0] == Buffer.TYPE_INT) { |
680 |
for (int i = 0; i < values.getSize(); i++) { |
681 |
int[] rc = getColAndRow(i, buf); |
682 |
for (int iBands = 0; iBands < drawableBands.length; iBands++) |
683 |
buf.setElem(rc[0], rc[1], drawableBands[iBands], values.getInt(i)); |
684 |
} |
685 |
} |
686 |
|
687 |
if(getDataType()[0] == Buffer.TYPE_FLOAT) { |
688 |
for (int i = 0; i < values.getSize(); i++) { |
689 |
int[] rc = getColAndRow(i, buf); |
690 |
for (int iBands = 0; iBands < drawableBands.length; iBands++) |
691 |
buf.setElem(rc[0], rc[1], drawableBands[iBands], values.getFloat(i)); |
692 |
} |
693 |
} |
694 |
|
695 |
if(getDataType()[0] == Buffer.TYPE_DOUBLE) { |
696 |
for (int i = 0; i < values.getSize(); i++) { |
697 |
int[] rc = getColAndRow(i, buf); |
698 |
for (int iBands = 0; iBands < drawableBands.length; iBands++) |
699 |
buf.setElem(rc[0], rc[1], drawableBands[iBands], values.getDouble(i)); |
700 |
} |
701 |
} |
702 |
if(resampling) {
|
703 |
try {
|
704 |
Buffer result = null; |
705 |
result = buf.getAdjustedWindow(rasterBuf.getWidth(), rasterBuf.getHeight(), Buffer.INTERPOLATION_NearestNeighbour);
|
706 |
if(result != buf)
|
707 |
buf.dispose(); |
708 |
return result;
|
709 |
} catch (ProcessInterruptedException e) {
|
710 |
return buf;
|
711 |
} |
712 |
} |
713 |
return buf;
|
714 |
} |
715 |
|
716 |
/**
|
717 |
* Calculates the row and column number for the position i in the
|
718 |
* array of data
|
719 |
* @param i
|
720 |
* @param buf
|
721 |
* @return
|
722 |
*/
|
723 |
private int[] getColAndRow(int i, Buffer buf) { |
724 |
int auxRow = (int)(i / buf.getWidth()); |
725 |
return new int[]{ |
726 |
(int)buf.getHeight() - auxRow - 1, |
727 |
i - (auxRow * buf.getWidth()) |
728 |
}; |
729 |
} |
730 |
|
731 |
private void adjustPoints(Point2D ul, Point2D lr) { |
732 |
double a = (ul.getX() - (int)ul.getX()); |
733 |
double b = (ul.getY() - (int)ul.getY()); |
734 |
ul.setLocation( (a > 0.95 || a < 0.05) ? Math.round(ul.getX()) : ul.getX(), |
735 |
(b > 0.95 || b < 0.05) ? Math.round(ul.getY()) : ul.getY()); |
736 |
lr.setLocation( (a > 0.95 || a < 0.05) ? Math.round(lr.getX()) : lr.getX(), |
737 |
(b > 0.95 || b < 0.05) ? Math.round(lr.getY()) : lr.getY()); |
738 |
} |
739 |
|
740 |
public int getBlockSize(){ |
741 |
return 0; |
742 |
} |
743 |
|
744 |
public ColorInterpretation getColorInterpretation() {
|
745 |
if(super.getColorInterpretation() == null) { |
746 |
setColorInterpretation(new DataStoreColorInterpretation(new String[]{ColorInterpretation.GRAY_BAND})); |
747 |
} |
748 |
return super.getColorInterpretation(); |
749 |
} |
750 |
|
751 |
public DataStoreTransparency getTransparency() {
|
752 |
if(fileTransparency == null) |
753 |
fileTransparency = new DataStoreTransparency(getColorInterpretation());
|
754 |
return fileTransparency;
|
755 |
} |
756 |
|
757 |
/**
|
758 |
* Informa de si el driver ha supersampleado en el �ltimo dibujado. Es el driver el que colocar�
|
759 |
* el valor de esta variable cada vez que dibuja.
|
760 |
* @return true si se ha supersampleado y false si no se ha hecho.
|
761 |
*/
|
762 |
public boolean isSupersampling() { |
763 |
return false; |
764 |
} |
765 |
|
766 |
public void setAffineTransform(AffineTransform t){ |
767 |
super.setAffineTransform(t);
|
768 |
} |
769 |
|
770 |
public int getOverviewCount(int band) throws BandAccessException, RasterDriverException { |
771 |
if(band >= getBandCount())
|
772 |
throw new BandAccessException("Wrong band"); |
773 |
return 0; |
774 |
} |
775 |
|
776 |
public int getOverviewWidth(int band, int overview) throws BandAccessException, RasterDriverException { |
777 |
if (band >= getBandCount())
|
778 |
throw new BandAccessException("Wrong band"); |
779 |
return 0; |
780 |
} |
781 |
|
782 |
public int getOverviewHeight(int band, int overview) throws BandAccessException, RasterDriverException { |
783 |
if (band >= getBandCount())
|
784 |
throw new BandAccessException("Wrong band"); |
785 |
return 0; |
786 |
} |
787 |
|
788 |
public boolean isOverviewsSupported() { |
789 |
return true; |
790 |
} |
791 |
|
792 |
public boolean isReproyectable() { |
793 |
return true; |
794 |
} |
795 |
|
796 |
public String getProviderName() { |
797 |
return NAME;
|
798 |
} |
799 |
|
800 |
public void setStatus(RasterProvider provider) { |
801 |
if(provider instanceof NetCDFProvider) { |
802 |
//Not implemented yet
|
803 |
} |
804 |
} |
805 |
|
806 |
public boolean isTimeSupported() { |
807 |
return true; |
808 |
} |
809 |
|
810 |
public TileServer getTileServer() {
|
811 |
if(tileServer == null) { |
812 |
DefaultRasterStore store = new DefaultRasterStore();
|
813 |
store.setProvider(this);
|
814 |
tileServer = new FileTileServer(store);
|
815 |
} |
816 |
return tileServer;
|
817 |
} |
818 |
|
819 |
public void addFile(File file) throws InvalidSourceException { |
820 |
// Do nothing
|
821 |
} |
822 |
|
823 |
public void removeFile(File file) { |
824 |
// Do nothing
|
825 |
} |
826 |
} |